Basic Information
Locus ID:
Chr17G011710
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Domain of unknown function (DUF4220)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 29224122 | 29224982 | + | Chr17G011710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | NP_001169552.1 | uncharacterized protein LOC100383431 precursor [Zea mays] | 0 |
| TrEMBL | A0A8T0W6X8 | Transposon protein-like protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG183458 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 21 | AH03.846, AH06.2807, AH08.1580, AH09.657, BH01.2974, BH06.72 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_8BG0662420 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_041727 |
| Poaceae | Oryza coarctata | 6 | Oco04G010980, Oco07G006700, Oco09G013450, Oco10G000820 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os05g36240.1, LOC_Os07g05840.1, LOC_Os11g41770.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0205778 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr17G011710, Chr29G008210 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5AG051480 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-28977, nbis-gene-48363 |
| Poaceae | Zoysia macrostachya | 5 | Zma_g10227, Zma_g23699, Zma_g23855, Zma_g32507, Zma_g32508 |