Basic Information
Locus ID:
Chr17G010230
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 18545124 | 18547692 | + | Chr17G010230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 165 | 211 | 8.8E-10 | IPR006652 |
| Pfam | PF00646 | F-box domain | 18 | 50 | 2.5E-7 | IPR001810 |
| SUPERFAMILY | SSF117281 | Kelch motif | 94 | 356 | 5.1E-43 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 57 | 2.22E-8 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 33 | 291 | 3.3E-36 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 292 | 368 | 2.3E-6 | IPR015915 |
| SMART | SM00612 | kelc_smart | 128 | 176 | 1.7E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 177 | 226 | 1.7E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 227 | 276 | 8.4 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_025827219.1 | F-box/kelch-repeat protein At2g44130-like [Panicum hallii] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1E5VAS5 | F-box/kelch-repeat protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016726 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology