Basic Information
Locus ID:
Chr17G006340
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 9388393 | 9390129 | + | Chr17G006340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 380 | 447 | 1.7E-6 | IPR032838 |
| Pfam | PF13768 | von Willebrand factor type A domain | 40 | 187 | 2.9E-20 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 36 | 202 | 1.31E-26 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 40 | 211 | 4.0E-36 | IPR036465 |
| SMART | SM00327 | VWA_4 | 38 | 207 | 1.8E-18 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 40 | 209 | 17.050518 | IPR002035 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_025828708.1 | uncharacterized protein LOC112903696 [Panicum hallii] | 0 |
| Q9GLY5 | Inter-alpha-trypsin inhibitor heavy chain H3 OS=Oryctolagus cuniculus OX=9986 GN=ITIH3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811RQF5 | VWFA domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS56102 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology