Basic Information
Locus ID:
Chr17G003510
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 4227511 | 4247286 | - | Chr17G003510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1000 | 1260 | 5.60616E-144 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 4 | 150 | 2.5E-20 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1039 | 1202 | 5.7E-34 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1205 | 1259 | 4.5E-7 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 999 | 1261 | 1.05E-79 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 3 | 119 | 3.98E-25 | IPR027409 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 1 | 119 | 3.5E-32 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 952 | 1118 | 2.3E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1120 | 1262 | 1.1E-41 | - |
| SMART | SM00330 | PIPK_2 | 976 | 1262 | 1.0E-120 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 938 | 1261 | 58.489014 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 818 | 839 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_025812014.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A-like isoform X1 [Panicum hallii] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WF30 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Eragrostis curvula OX=38414 GN=EJB05_06201 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology