Basic Information
Locus ID:
Chr17G002930
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 3181476 | 3182564 | - | Chr17G002930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 120 | 235 | 2.02011E-49 | - |
| CDD | cd00121 | MATH | 41 | 97 | 5.82411E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 125 | 238 | 3.5E-25 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 112 | 237 | 3.34E-31 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 110 | 233 | 5.4E-37 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 238 | 305 | 3.3E-20 | - |
| SMART | SM00225 | BTB_4 | 134 | 239 | 3.7E-25 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 134 | 201 | 17.148424 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039815053.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W3X7 | Speckle-type POZ protein-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09045 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology