Basic Information
Locus ID:
Chr17G002320
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 2526050 | 2533253 | + | Chr17G002320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 734 | 1000 | 1.30534E-99 | - |
| Pfam | PF00069 | Protein kinase domain | 731 | 933 | 2.3E-44 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 427 | 613 | 4.8E-42 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 88 | 397 | 3.74E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 704 | 998 | 5.06E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 804 | 1012 | 9.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 700 | 803 | 2.4E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 278 | 403 | 3.3E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 210 | 277 | 1.6E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 61 | 209 | 2.6E-33 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 424 | 618 | 2.3E-32 | - |
| SMART | SM00220 | serkin_6 | 728 | 998 | 3.4E-30 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 241 | 267 | 20.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 314 | 340 | 34.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 145 | 171 | 640.0 | - |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 23 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 728 | 1008 | 36.074928 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 734 | 756 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 849 | 861 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1032 | 1063 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_039853302.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Panicum virgatum] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9W2N6 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology