Basic Information
Locus ID:
Chr17G001130
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 991120 | 992218 | - | Chr17G001130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 17 | 59 | 2.0E-5 | IPR001810 |
| Pfam | PF14299 | Phloem protein 2 | 79 | 221 | 3.5E-22 | IPR025886 |
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 100 | 5.89E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 109 | 9.6E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 13 | 59 | 8.941087 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56250.1 | phloem protein 2-B14. | 0 |
| RefSeq | XP_025819896.1 | F-box protein PP2-B11-like [Panicum hallii] | 0 |
| Q9C7K0 | F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W454 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09137 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology