Basic Information
Locus ID:
Chr17G000030
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 27513 | 30112 | - | Chr17G000030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 495 | 782 | 1.96965E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 490 | 711 | 1.2E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 471 | 782 | 1.07E-72 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 91 | 317 | 5.1E-16 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 574 | 793 | 7.4E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 463 | 573 | 3.8E-30 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 88 | 447 | 3.8E-22 | IPR009091 |
| SMART | SM00220 | serkin_6 | 489 | 784 | 5.2E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 489 | 784 | 39.396416 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 495 | 517 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 624 | 636 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | NP_001344475.1 | Serine/threonine-protein kinase-like protein CCR4 [Zea mays] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6EAE0 | Serine/threonine-protein kinase-like protein CCR4 OS=Zea mays OX=4577 GN=CCR4_0 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology