Basic Information
Locus ID:
Chr16G017630
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 47199287 | 47213135 | - | Chr16G017630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 58 | 165 | 6.35853E-17 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 188 | 297 | 3.7E-13 | IPR000210 |
| Pfam | PF00917 | MATH domain | 59 | 161 | 3.0E-9 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 48 | 170 | 1.13E-22 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 173 | 301 | 3.03E-20 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 302 | 365 | 2.5E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 171 | 297 | 4.3E-25 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 46 | 170 | 2.3E-20 | IPR008974 |
| SMART | SM00225 | BTB_4 | 194 | 303 | 8.8E-9 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 42 | 165 | 18.524368 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 194 | 266 | 12.639748 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_047073914.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium rigidum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T136 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48139 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology