Basic Information
Locus ID:
Chr16G014940
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 43101413 | 43107663 | + | Chr16G014940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 94 | 154 | 8.3E-11 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 292 | 546 | 3.9E-44 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 8 | 43 | 9.1E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 271 | 547 | 1.25E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 5 | 167 | 1.08E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 264 | 364 | 1.6E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 365 | 563 | 7.2E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 6 | 184 | 9.9E-51 | IPR032675 |
| SMART | SM00220 | serkin_6 | 289 | 546 | 6.7E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 289 | 556 | 36.173866 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 407 | 419 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 295 | 317 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 141 | 154 | 4.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 96 | 109 | 4.9E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 603 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 610 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_002445573.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Sorghum bicolor] | 0 |
| Q0WVM4 | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811R5M1 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS48643 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology