Basic Information
Locus ID:
Chr16G014260
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 41051427 | 41062353 | + | Chr16G014260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 33 | 67 | 3.5E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 26 | 69 | 2.62E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 76 | 165 | 1.13E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 244 | 4.5E-14 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 115 | 140 | 110.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 89 | 114 | 0.054 | IPR006553 |
| ProSitePatterns | PS00198 | 4Fe-4S ferredoxin-type iron-sulfur binding region signature. | 233 | 244 | - | IPR017900 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_002444372.1 | F-box protein SKIP28 [Sorghum bicolor] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9VIW5 | F-box domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology