Basic Information
Locus ID:
Chr16G014140
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Mitogen-activated protein kinase kinase kinase 19
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 40566958 | 40594294 | - | Chr16G014140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 2 | 93 | 2.4E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 93 | 1.63E-18 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 100 | 3.8E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 108 | 12.061262 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 108 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G09000.2 | - | 0 |
| RefSeq | XP_004973456.1 | mitogen-activated protein kinase kinase kinase NPK1 [Setaria italica] | 0 |
| Q40541 | Mitogen-activated protein kinase kinase kinase NPK1 OS=Nicotiana tabacum OX=4097 GN=NPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6Q155 | NPK1-related protein kinase 2 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d050329 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1026 |
| Poaceae | Echinochloa crus-galli | 1 | BH06.1345 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr16G014140 |