Basic Information
Locus ID:
Chr16G012540
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 30628758 | 30645239 | - | Chr16G012540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 344 | 638 | 1.1405E-120 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 313 | 624 | 6.0E-91 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 345 | 650 | 9.56E-69 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 347 | 643 | 1.7E-44 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 165 | - | - |
| Coils | Coil | Coil | 275 | 295 | - | - |
| Coils | Coil | Coil | 223 | 243 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_039816325.1 | probable galacturonosyltransferase 4 isoform X1 [Panicum virgatum] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9T5G7 | Hexosyltransferase OS=Eragrostis curvula OX=38414 GN=EJB05_49844 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology