Basic Information
Locus ID:
Chr16G011130
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 17983512 | 17989359 | + | Chr16G011130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 375 | 656 | 4.3E-48 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 37 | 332 | 2.2E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 15 | 333 | 1.94E-66 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 363 | 658 | 4.45E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 108 | 3.8E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 352 | 446 | 4.0E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 467 | 668 | 1.7E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 126 | 351 | 1.3E-45 | - |
| SMART | SM00220 | serkin_6 | 374 | 656 | 4.4E-30 | IPR000719 |
| SMART | SM00220 | serkin_6 | 34 | 339 | 8.6E-15 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 34 | 348 | 35.184486 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 374 | 668 | 36.569618 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 40 | 63 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 509 | 521 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 380 | 403 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021317235.1 | probable serine/threonine-protein kinase PBL23 isoform X1 [Sorghum bicolor] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A1B6PRC2 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3005G096400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology