Basic Information
Locus ID:
Chr16G007810
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
UBA1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 10936490 | 10946572 | + | Chr16G007810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 459 | 967 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 42 | 427 | 9.61736E-150 | - |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 217 | 287 | 4.8E-25 | IPR032418 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 289 | 358 | 7.0E-20 | IPR032420 |
| Pfam | PF00899 | ThiF family | 440 | 904 | 1.7E-53 | IPR000594 |
| Pfam | PF09358 | Ubiquitin fold domain | 920 | 1009 | 1.1E-23 | IPR018965 |
| Pfam | PF00899 | ThiF family | 44 | 422 | 3.0E-30 | IPR000594 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 613 | 866 | 8.7E-85 | IPR019572 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 434 | 904 | 6.18E-114 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 37 | 424 | 3.27E-99 | IPR035985 |
| Gene3D | G3DSA:3.50.50.80 | - | 33 | 151 | 8.1E-38 | IPR042449 |
| Gene3D | G3DSA:2.40.30.180 | - | 205 | 286 | 4.1E-107 | IPR042302 |
| Gene3D | G3DSA:3.40.50.720 | - | 460 | 908 | 6.0E-161 | - |
| Gene3D | G3DSA:1.10.10.2660 | - | 598 | 873 | 6.0E-161 | IPR042063 |
| Gene3D | G3DSA:3.40.50.12550 | - | 162 | 450 | 4.1E-107 | - |
| Gene3D | G3DSA:3.10.290.60 | - | 922 | 1012 | 2.1E-22 | IPR038252 |
| SMART | SM00985 | UBA_e1_C_a_2 | 887 | 1009 | 5.9E-49 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 37 | 1014 | 0.0 | IPR018075 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 605 | 613 | - | IPR033127 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 402 | 410 | - | IPR018074 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 520 | 545 | 7.8E-56 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 674 | 701 | 7.8E-56 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 179 | 206 | 7.8E-56 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 64 | 88 | 7.8E-56 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 473 | 496 | 7.8E-56 | IPR000011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_039835368.1 | ubiquitin-activating enzyme E1 2 [Panicum virgatum] | 0 |
| P31251 | Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum OX=4565 GN=UBA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UWN4 | E1 ubiquitin-activating enzyme OS=Eragrostis curvula OX=38414 GN=EJB05_30071 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology