Basic Information
Locus ID:
Chr16G007570
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 10428490 | 10434970 | - | Chr16G007570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 221 | 445 | 7.7E-30 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 191 | 463 | 4.18E-58 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 222 | 247 | 1.5E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 248 | 454 | 8.8E-45 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 7 | 119 | 1.5E-25 | IPR036537 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 175 | 221 | 5.9E-8 | - |
| SMART | SM00220 | serkin_6 | 205 | 448 | 1.5E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 127 | 448 | 25.318953 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 295 | 307 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23230.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 15. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_025826831.1 | cysteine-rich receptor-like protein kinase 10 [Panicum hallii] | 0 |
| Q8W4G6 | Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana OX=3702 GN=CRK15 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0A8ZBG1 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH04.2576 |
| Poaceae | Oryza coarctata | 1 | Oco21G009560 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_05G254200, gene-BS78_K262300, gene-BS78_K341200 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr16G007570 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G128200 |
| Poaceae | Triticum aestivum | 1 | TraesCS6B02G067800.1 |
| Poaceae | Zea mays | 1 | Zm00001eb115890_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18271 |