Basic Information
Locus ID:
Chr16G006950
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 8968216 | 8973670 | + | Chr16G006950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 153 | 218 | 7.7E-6 | IPR032838 |
| Pfam | PF04535 | Domain of unknown function (DUF588) | 246 | 388 | 1.3E-17 | IPR006702 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 207 | - | - |
| Coils | Coil | Coil | 127 | 147 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039777425.1 | uncharacterized protein LOC120644782 [Panicum virgatum] | 0 |
| C5XEK4 | CASP-like protein 4U1 OS=Sorghum bicolor OX=4558 GN=Sb03g029220 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UNN9 | VWFA domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27867 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology