HalophFGD

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Basic Information
Locus ID: Chr16G005030
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description: source UniProtKB
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000016 5600065 5601563 - Chr16G005030
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 448 472 - -
MobiDBLite mobidb-lite consensus disorder prediction 40 54 - -
MobiDBLite mobidb-lite consensus disorder prediction 34 54 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_035816135.1 uncharacterized protein LOC103630694 isoform X1 [Zea mays] 0
TrEMBL A0A5J9VUZ6 CCHC-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_12866 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 53 AH01.2876, AH01.32, AH02.628, AH03.1625, AH03.1818, AH06.974 ...
AH03.2386, AH03.3791, AH05.2232, AH05.2365, AH05.3376, AH05.3377, AH07.1084, AH09.216, BH01.2924, BH01.2942, BH01.4430, BH02.2488, BH02.375, BH03.2585, BH03.3111, BH04.1454, BH04.2033, BH04.641, BH05.2434, BH06.2036, BH06.2594, BH07.2578, BH07.3486, BH08.2352, BH09.139, BH09.2381, BH09.2658, BH09.696, BH09.703, CH01.3699, CH03.848, CH04.1465, CH04.2024, CH04.2118, CH06.1197, CH06.2628, CH07.1997, CH08.1709, CH08.940, CH09.13, CH09.3169, CH09.4, CH09.503, CH09.643, CH09.813, Contig1593.5, Contig328.10
Poaceae Lolium multiflorum 1 gene-QYE76_046977
Poaceae Oryza coarctata 1 Oco17G000100
Poaceae Paspalum vaginatum 8 gene-BS78_01G253900, gene-BS78_02G100600, gene-BS78_K215400 ...
gene-BS78_02G149600, gene-BS78_05G265400, gene-BS78_07G063300, gene-BS78_08G130200, gene-BS78_09G053800
Poaceae Puccinellia tenuiflora 2 Pt_Chr0302147, Pt_Chr0601454
Poaceae Sporobolus alterniflorus 11 Chr01G023520, Chr01G024930, Chr05G016830, Chr05G025730 ...
Chr06G032710, Chr10G017280, Chr13G010300, Chr16G005030, Chr24G008800, Chr24G013200, Chr31G006060
Poaceae Zoysia macrostachya 1 Zma_g5044
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.