Basic Information
Locus ID:
Chr16G004330
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 4735093 | 4736301 | + | Chr16G004330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 71 | 1.2E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 347 | 6.8E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 269 | 364 | 3.7E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 266 | 3.0E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 196 | 1.2E-27 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 402 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_025791245.1 | probable inactive leucine-rich repeat receptor kinase XIAO [Panicum hallii] | 0 |
| TrEMBL | A0A5J9UJA8 | LRRNT_2 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_26253 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology