Basic Information
Locus ID:
Chr16G003810
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 4138003 | 4171662 | - | Chr16G003810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1532 | 1793 | 5.27564E-144 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 381 | 652 | 7.59904E-124 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 385 | 649 | 3.2E-33 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1737 | 1791 | 6.7E-7 | IPR002498 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 100 | 3.4E-17 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1571 | 1734 | 4.0E-34 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1531 | 1793 | 6.54E-81 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 102 | 2.83E-20 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 446 | 618 | 2.2E-40 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 107 | 1.8E-21 | IPR013083 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1485 | 1650 | 7.8E-37 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 445 | 618 | 4.9E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1652 | 1794 | 4.0E-42 | - |
| SMART | SM00330 | PIPK_2 | 1508 | 1794 | 8.5E-122 | IPR002498 |
| SMART | SM00064 | fyve_4 | 28 | 102 | 2.3E-20 | IPR000306 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 101 | 13.233033 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1470 | 1793 | 59.005817 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 349 | 368 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_025812014.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A-like isoform X1 [Panicum hallii] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WF30 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Eragrostis curvula OX=38414 GN=EJB05_06201 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology