Basic Information
Locus ID:
Chr16G003560
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 3810949 | 3812171 | + | Chr16G003560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 11 | 141 | 4.58E-8 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 90 | 1.7E-8 | IPR015943 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052157334.1 | protein ROOT INITIATION DEFECTIVE 3-like [Oryza glaberrima] | 0 |
| TrEMBL | A0A5J9SWS4 | WD_REPEATS_REGION domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_51085 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 2 | Oco09G005710, Oco10G006270 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g23560.1 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr16G003560, Chr17G003240 |