Basic Information
Locus ID:
Chr16G002990
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 3154555 | 3156250 | - | Chr16G002990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 115 | 396 | 6.0E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 97 | 397 | 5.19E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 76 | 192 | 1.2E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 193 | 406 | 2.0E-53 | - |
| SMART | SM00220 | serkin_6 | 112 | 396 | 6.0E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 112 | 411 | 34.124435 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 118 | 144 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 238 | 250 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18250.1 | receptor serine/threonine kinase, putative. | 0 |
| RefSeq | XP_039855824.1 | rust resistance kinase Lr10-like [Panicum virgatum] | 0 |
| Q9FF29 | PR5-like receptor kinase OS=Arabidopsis thaliana OX=3702 GN=PR5K PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7D4Y7 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_6G074900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology