Basic Information
Locus ID:
Chr16G002900
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Cytidylyltransferase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000016 | 3052391 | 3057047 | + | Chr16G002900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02173 | ECT | 257 | 405 | 7.12227E-76 | - |
| CDD | cd02174 | CCT | 69 | 207 | 4.49444E-80 | IPR041723 |
| Pfam | PF01467 | Cytidylyltransferase-like | 262 | 351 | 3.0E-16 | IPR004821 |
| Pfam | PF01467 | Cytidylyltransferase-like | 74 | 202 | 3.9E-25 | IPR004821 |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 72 | 205 | 4.64E-28 | - |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 259 | 363 | 1.58E-21 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 236 | 398 | 1.3E-54 | IPR014729 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 58 | 235 | 1.2E-57 | IPR014729 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 72 | 137 | 2.6E-19 | IPR004821 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 260 | 326 | 7.3E-17 | IPR004821 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38670.1 | phosphorylethanolamine cytidylyltransferase 1. Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. | 0 |
| RefSeq | XP_039853386.1 | ethanolamine-phosphate cytidylyltransferase-like isoform X2 [Panicum virgatum] | 0 |
| Q9ZVI9 | Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana OX=3702 GN=PECT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0R9F9 | ethanolamine-phosphate cytidylyltransferase OS=Panicum virgatum OX=38727 GN=PVAP13_6KG108700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology