Basic Information
Locus ID:
Chr15G025130
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Ubiquitin fusion degradation protein UFD1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 50537620 | 50540895 | - | Chr15G025130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 13 | 184 | 7.8E-80 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 6 | 107 | 8.8E-44 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 109 | 182 | 1.2E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 268 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_004951680.1 | ubiquitin fusion degradation protein 1 homolog [Setaria italica] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9SVF0 | Ubiquitin fusion degradation protein 1 homolog (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_51584 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology