Basic Information
Locus ID:
Chr15G024880
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 50300350 | 50310708 | - | Chr15G024880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 424 | 696 | 5.2E-37 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 106 | 163 | 3.4E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 88 | 259 | 8.26E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 399 | 696 | 1.66E-63 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 721 | 1.3E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 385 | 499 | 1.5E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 64 | 266 | 3.3E-37 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 420 | 699 | 32.075005 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 107 | 120 | 6.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 174 | 187 | 6.9E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 271 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_015627233.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 [Oryza sativa Japonica Group] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811PPI9 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS31941 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology