Basic Information
Locus ID:
Chr15G024340
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 49741207 | 49743830 | + | Chr15G024340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 33 | 73 | 1.8E-4 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 188 | 210 | 0.0072 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 31 | 71 | 3.79E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 136 | 414 | 2.82E-35 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 269 | 615 | 1.43E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 261 | 1.3E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 480 | 610 | 5.6E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 423 | 479 | 2.2E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 262 | 422 | 6.9E-19 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 214 | 239 | 1.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 452 | 477 | 0.049 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 240 | 268 | 13.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 426 | 451 | 45.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 532 | 556 | 0.061 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 372 | 397 | 230.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 346 | 371 | 0.054 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 320 | 345 | 29.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 479 | 504 | 17.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 162 | 187 | 0.03 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 558 | 583 | 460.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 188 | 213 | 9.6E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 506 | 531 | 0.0069 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_025798413.1 | EIN3-binding F-box protein 2-like [Panicum hallii] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5VY32 | EIN3-binding F-box protein 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0008956 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology