Basic Information
Locus ID:
Chr15G024220
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 49571782 | 49581390 | - | Chr15G024220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 13 | 175 | 2.9E-38 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 3 | 178 | 3.51E-59 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 1 | 184 | 7.9E-66 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 176 | 36.634777 | IPR002130 |
| ProSiteProfiles | PS51214 | IBB domain profile. | 254 | 319 | 8.534693 | IPR002652 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 107 | 122 | 7.9E-22 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 135 | 150 | 7.9E-22 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 27 | 42 | 7.9E-22 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 76 | 7.9E-22 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 134 | 7.9E-22 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 860 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 555 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 463 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 625 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 846 | 860 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 806 | 820 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.2 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | NP_001345426.1 | Peptidyl-prolyl cis-trans isomerase CYP95 [Zea mays] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835FQH6 | PPIase cyclophilin-type domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_006283 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology