Basic Information
Locus ID:
Chr15G023090
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 47786993 | 47797957 | - | Chr15G023090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 131 | 205 | 3.79129E-13 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 241 | 337 | 8.5E-9 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 131 | 219 | 2.7E-15 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 418 | 531 | 4.25E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 131 | 219 | 1.88E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 111 | 254 | 7.9E-19 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 255 | 360 | 5.7E-14 | - |
| SMART | SM00875 | BACK_2 | 235 | 339 | 3.2E-9 | IPR011705 |
| SMART | SM00225 | BTB_4 | 124 | 222 | 5.7E-11 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 118 | 191 | 14.025441 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 85 | - | - |
| Coils | Coil | Coil | 61 | 85 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | NP_001142262.1 | BTB/POZ domain-containing protein POB1-like isoform 2 [Zea mays] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9VCD6 | BTB domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_25159 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology