Basic Information
Locus ID:
Chr15G022520
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 46999082 | 47003048 | - | Chr15G022520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 515 | 716 | 2.8E-60 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 328 | 473 | 4.3E-46 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 194 | 254 | 3.0E-17 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 327 | 716 | 8.0E-169 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 533 | 707 | 8.0E-169 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 387 | 421 | 9.985802 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 203 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 203 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 167 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_025801517.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Panicum hallii] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V977 | ribonuclease P OS=Eragrostis curvula OX=38414 GN=EJB05_24341 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology