Basic Information
Locus ID:
Chr15G017400
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 32499202 | 32503063 | + | Chr15G017400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 325 | 575 | 2.3E-35 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 18 | 111 | 1.8E-7 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 148 | 228 | 4.1E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 307 | 603 | 9.85E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 284 | 398 | 2.5E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 399 | 593 | 1.4E-46 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 18 | 111 | 2.0E-9 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 129 | 231 | 1.2E-17 | IPR038408 |
| SMART | SM00220 | serkin_6 | 324 | 583 | 3.1E-18 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 122 | 231 | 15.88236 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 7 | 115 | 12.198154 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 324 | 584 | 26.039787 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 427 | 439 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_034575970.1 | cysteine-rich receptor-like protein kinase 10 isoform X2 [Setaria viridis] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V7N0 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_23135 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology