halophFGD

Basic Information

Locus ID: Chr15G014260

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
GWHCBIM00000015	17950456	17950812	-	Chr15G014260

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	49	107	2.9E-6	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	43	109	2.67E-13	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	4	108	3.8E-17	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	42	118	9.531276	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G47110.1	Leucine-rich repeat protein kinase family protein.
RefSeq	XP_034606281.1	putative receptor-like protein kinase At3g47110 [Setaria viridis]
Swiss-Prot	Q1MX30	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1
TrEMBL	A0A5J9UD34	Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_30628 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	1	Ah013669
Poaceae	Sporobolus alterniflorus	1	Chr15G014260