Basic Information
Locus ID:
Chr15G013770
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 16569710 | 16571746 | - | Chr15G013770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 48 | 273 | 5.95269E-75 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 50 | 280 | 2.0E-48 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 376 | 634 | 7.7E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 355 | 668 | 3.37E-71 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 41 | 275 | 1.35E-50 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 39 | 282 | 1.0E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 333 | 447 | 1.1E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 657 | 5.9E-56 | - |
| SMART | SM00220 | serkin_6 | 371 | 636 | 2.8E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 643 | 32.795841 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 160 | 166 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 492 | 504 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_034579045.1 | L-type lectin-domain containing receptor kinase S.6-like [Setaria viridis] | 0 |
| A0A0P0VIP0 | L-type lectin-domain containing receptor kinase S.7 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRKS7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835KRH8 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_010619 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology