Basic Information
Locus ID:
Chr15G010110
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
No apical meristem (NAM) protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 10629628 | 10632747 | + | Chr15G010110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 44 | 167 | 3.2E-11 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 29 | 186 | 1.23E-24 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 53 | 189 | 2.8E-11 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 43 | 186 | 13.168815 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 231 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_039790280.1 | NAC domain-containing protein 73-like isoform X2 [Panicum virgatum] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0WR43 | NAC domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG328200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology