Basic Information
Locus ID:
Chr15G009260
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Bromodomain extra-terminal - transcription regulation
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 9719855 | 9721189 | + | Chr15G009260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| Coils | Coil | Coil | 336 | 360 | - | - |
| Coils | Coil | Coil | 310 | 330 | - | - |
| Coils | Coil | Coil | 366 | 390 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025816807.1 | nucleolin 2-like [Panicum hallii] | 0 |
| TrEMBL | A0A5J9V0E0 | Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_20919 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Sporobolus alterniflorus | 9 | Chr06G007670, Chr06G007980, Chr09G012500, Chr09G012510 ... |