Basic Information
Locus ID:
Chr15G007100
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 6870598 | 6874053 | - | Chr15G007100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 23 | 433 | 1.661E-46 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 10 | 393 | 1.5E-25 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 10 | 437 | 2.49E-40 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 7 | 438 | 6.8E-42 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 6 | 439 | 14.312489 | IPR020846 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 377 | 400 | 5.1E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 56 | 72 | 5.1E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 317 | 338 | 5.1E-5 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | NP_001144256.2 | uncharacterized LOC100277128 precursor [Zea mays] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A1D6HFI1 | Major facilitator superfamily protein OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d017536 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology