Basic Information
Locus ID:
Chr15G005030
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000015 | 4429112 | 4429706 | - | Chr15G005030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12650.1 | 0 | |
| RefSeq | XP_002454384.1 | uncharacterized protein LOC8077728 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9UYC0 | Transmembrane protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_19779 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg26685 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_8288 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g029500 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg22035 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg15962 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00008581 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl62978, Sgl63077, Sgl67686 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000018700, gene:ENSEOMG00000050632 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0016750, CQ.Regalona.r1.2BG0018550 |
| Apiaceae | Apium graveolens | 2 | Ag1G00307, Ag2G02765 |
| Arecaceae | Cocos nucifera | 1 | COCNU_01G012130 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103711370, gene-LOC103720334 |
| Asteraceae | Flaveria trinervia | 1 | Ftri11G23640 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G12650.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10021417m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g10790.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB01g052440.2N, BniB02g029910.2N, BniB07g026210.2N |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g05620 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g08600 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.43 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00030980 |
| Poaceae | Echinochloa crus-galli | 4 | AH07.3234, BH07.3062, CH05.1311, CH07.3139 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0143460, gene-QOZ80_2BG0198860 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0609800.1.CDS1 |
| Poaceae | Oryza coarctata | 1 | Oco03G019910 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g48680.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G256000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0203518, Pt_Chr0203545 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr06G003610, Chr09G021560, Chr15G005030 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G515000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG043040, gene_TRIDC6BG050460 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G281700.1.cds1, TraesCS6B02G310400.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb189290_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-22016, nbis-gene-8904 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g14285, Zma_g17034 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG02.2380, evm.TU.LG06.1130, evm.TU.LG16.1561 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g10320 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.332 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-18933 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-6547 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-6962 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000028l.85 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00010851 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-20253 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-20147 |
| Salicaceae | Populus euphratica | 2 | populus_peu01846, populus_peu35974 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132632885 |
| Solanaceae | Solanum chilense | 1 | SOLCI003997300 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107012543 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.1999_chr01_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G0017 |
| Zosteraceae | Zostera marina | 1 | Zosma05g21500.v3.1 |