Basic Information
Locus ID:
Chr14G017670
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000014 | 48192835 | 48195921 | + | Chr14G017670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 141 | 199 | 4.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 238 | 299 | 2.3E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 706 | 901 | 4.9E-36 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 64 | 2.4E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 694 | 988 | 1.03E-62 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 263 | 597 | 1.13E-58 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 353 | 9.35E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 781 | 1.6E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 782 | 997 | 2.6E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 360 | 1.4E-58 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 138 | 3.4E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 361 | 629 | 2.5E-67 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 92 | 116 | 98.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 406 | 429 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 286 | 310 | 5.5 | IPR003591 |
| SMART | SM00220 | serkin_6 | 704 | 968 | 3.6E-21 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 236 | 260 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 553 | 577 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 502 | 526 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 455 | 478 | 280.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 704 | 987 | 30.887749 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 710 | 733 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 829 | 841 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_039809409.1 | receptor-like protein kinase HSL1 [Panicum virgatum] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6SPY7 | Receptor-like protein kinase HSL1 OS=Panicum miliaceum OX=4540 GN=C2845_PM07G40480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology