Basic Information
Locus ID:
Chr14G016580
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000014 | 47394236 | 47399683 | + | Chr14G016580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 592 | 933 | 2.14111E-96 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 597 | 924 | 2.3E-13 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 569 | 955 | 2.16E-57 | IPR036691 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 213 | 568 | 5.77E-19 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 159 | 574 | 6.8E-14 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 585 | 943 | 2.3E-93 | IPR036691 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 944 | 1069 | 3.4E-5 | IPR013783 |
| SMART | SM00320 | WD40_4 | 271 | 310 | 160.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 488 | 525 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 448 | 486 | 38.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 196 | 237 | 12.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 590 | 939 | 2.6E-83 | IPR000300 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1126 | 1155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 426 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_039795801.1 | type I inositol polyphosphate 5-phosphatase 13-like [Panicum virgatum] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T0W7L7 | IPPc domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG411746 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology