Basic Information
Locus ID:
Chr14G012310
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000014 | 42421093 | 42423991 | + | Chr14G012310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 133 | 191 | 7.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 419 | 479 | 2.3E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 610 | 873 | 1.8E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 591 | 881 | 3.91E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 247 | 532 | 2.21E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 340 | 3.74E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 122 | 3.5E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 687 | 886 | 4.1E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 591 | 686 | 1.1E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 203 | 534 | 5.1E-91 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 123 | 202 | 6.4E-19 | IPR032675 |
| SMART | SM00220 | serkin_6 | 607 | 879 | 8.1E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 442 | 466 | 4.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 226 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 154 | 178 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 130 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 81 | 104 | 160.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 607 | 887 | 35.000744 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 731 | 743 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 442 | 455 | 4.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 157 | 170 | 4.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_025801514.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TDY1 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42635 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology