Basic Information
Locus ID:
Chr14G012180
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000014 | 42269433 | 42270860 | - | Chr14G012180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 33 | 257 | 1.61891E-66 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 55 | 261 | 1.7E-54 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 54 | 259 | 1.96E-51 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 32 | 263 | 2.6E-58 | - |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 146 | 152 | - | IPR019825 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_025803324.1 | L-type lectin-domain containing receptor kinase IX.1-like [Panicum hallii] | 0 |
| O24313 | Basic agglutinin OS=Psophocarpus tetragonolobus OX=3891 GN=WBAI PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5WMS3 | Agglutinin-2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000541 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH03.1787, CH03.1958 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0100870.1.CDS1 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G156100, gene-BS78_05G241600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0107997 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G012180 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G102500, Tel3E01G784700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG004410, gene_TRIDC2AG004420 |
| Poaceae | Triticum aestivum | 11 | TraesCS2B02G054500.1, TraesCS2D02G040700.1 ... |