Basic Information
Locus ID:
Chr14G011260
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
CPK24
Description:
EF hand
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000014 | 40338302 | 40341315 | + | Chr14G011260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 465 | 524 | 9.00848E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 80 | 342 | 3.90651E-119 | - |
| Pfam | PF13499 | EF-hand domain pair | 464 | 523 | 2.8E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 393 | 450 | 1.3E-7 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 81 | 343 | 6.3E-65 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 372 | 538 | 1.15E-41 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 75 | 360 | 1.78E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 83 | 170 | 1.7E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 171 | 351 | 3.3E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 352 | 525 | 6.6E-48 | - |
| SMART | SM00054 | efh_1 | 498 | 526 | 2.1E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 81 | 343 | 4.2E-86 | IPR000719 |
| SMART | SM00054 | efh_1 | 390 | 418 | 0.017 | IPR002048 |
| SMART | SM00054 | efh_1 | 426 | 454 | 4.9 | IPR002048 |
| SMART | SM00054 | efh_1 | 462 | 490 | 0.0012 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 458 | 493 | 13.676544 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 494 | 529 | 13.537066 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 81 | 343 | 44.541195 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 422 | 457 | 8.739058 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 386 | 421 | 14.708673 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 471 | 483 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 507 | 519 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 399 | 411 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 87 | 110 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 205 | 217 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_025801213.1 | calcium-dependent protein kinase 22-like [Panicum hallii] | 0 |
| Q69IM9 | Calcium-dependent protein kinase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK22 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9TC25 | Calcium-dependent protein kinase 24 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42368 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology