Basic Information
Locus ID:
Chr14G008760
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000014 | 32002212 | 32005826 | + | Chr14G008760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 472 | 506 | 4.44237E-4 | - |
| CDD | cd14066 | STKc_IRAK | 602 | 867 | 2.09067E-88 | - |
| CDD | cd00054 | EGF_CA | 280 | 310 | 6.10555E-6 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 347 | 396 | 1.5E-9 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 28 | 88 | 5.2E-13 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 597 | 862 | 2.5E-42 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 280 | 311 | 1.7E-6 | IPR001881 |
| Pfam | PF07645 | Calcium-binding EGF domain | 472 | 503 | 5.0E-4 | IPR001881 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 244 | 513 | 3.14E-6 | IPR009030 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 279 | 314 | 4.66E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 580 | 866 | 1.07E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 672 | 890 | 2.2E-51 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 236 | 322 | 9.1E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 556 | 671 | 5.1E-31 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 472 | 513 | 5.8E-7 | - |
| SMART | SM00181 | egf_5 | 283 | 322 | 2.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 237 | 279 | 14.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 474 | 514 | 46.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 596 | 870 | 7.7E-29 | IPR000719 |
| SMART | SM00179 | egfca_6 | 280 | 322 | 7.4E-5 | IPR001881 |
| SMART | SM00179 | egfca_6 | 472 | 514 | 0.0095 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 596 | 876 | 36.074928 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 602 | 625 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 717 | 729 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 280 | 305 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.1 | wall associated kinase 3. encodes a wall-associated kinase | 0 |
| RefSeq | XP_039778131.1 | wall-associated receptor kinase-like 6 [Panicum virgatum] | 0 |
| A0A1D6E0S8 | Wall-associated receptor kinase 17 OS=Zea mays OX=4577 GN=WAK17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W684 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09941 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_6AG0525960, gene-QOZ80_6AG0525980 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0525250.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G008760 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG078570 |
| Poaceae | Zoysia japonica | 5 | nbis-gene-31881, nbis-gene-31882, nbis-gene-50705 ... |
| Poaceae | Zoysia macrostachya | 3 | Zma_g29880, Zma_g32067, Zma_g32068 |