Basic Information
Locus ID:
Chr14G006490
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000014 | 16369184 | 16370177 | + | Chr14G006490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 3 | 77 | 5.01224E-7 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 4 | 68 | 1.96E-11 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 2 | 120 | 6.9E-10 | IPR008974 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 167 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052169311.1 | BTB/POZ and MATH domain-containing protein 2-like [Oryza glaberrima] | 0 |
| TrEMBL | A0A5J9SG62 | MATH domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_56644 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0111710, gene-QOZ80_2AG0117420 ... |
| Poaceae | Sporobolus alterniflorus | 8 | Chr14G006490, Chr18G008260, Chr18G008270, Chr18G008280 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-43920 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g15244 |