Basic Information
Locus ID:
Chr13G021400
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Mitogen-activated protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000013 | 48229716 | 48233729 | - | Chr13G021400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07858 | STKc_TEY_MAPK | 33 | 369 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 44 | 326 | 1.1E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 43 | 333 | 2.56E-98 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 23 | 363 | 8.4E-162 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 124 | 353 | 8.4E-162 | - |
| SMART | SM00220 | serkin_6 | 40 | 326 | 1.7E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 326 | 46.025265 | IPR000719 |
| ProSitePatterns | PS01351 | MAP kinase signature. | 75 | 178 | - | IPR003527 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 162 | 174 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 70 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G01370.1 | MAP kinase 4. Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. | 0 |
| RefSeq | XP_004983829.1 | mitogen-activated protein kinase 6 [Setaria italica] | 0 |
| Q336X9 | Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK6 PE=2 SV=1 | 0 | |
| TrEMBL | K4ABI3 | Mitogen-activated protein kinase OS=Setaria italica OX=4555 GN=101786841 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology