Basic Information
Locus ID:
Chr13G020520
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000013 | 46170401 | 46174009 | + | Chr13G020520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 366 | 604 | 4.89099E-123 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 744 | 1007 | 6.6E-122 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 387 | 521 | 6.4E-31 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 381 | 529 | 1.39E-17 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 351 | 606 | 2.8E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 275 | 1010 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 384 | 613 | 31.059814 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 167 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 142 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 312 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_034572829.1 | translocase of chloroplast 120, chloroplastic-like [Setaria viridis] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VA85 | AIG1-type G domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_23481 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology