Basic Information
Locus ID:
Chr13G018130
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000013 | 37430961 | 37434523 | - | Chr13G018130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 306 | 406 | 2.60371E-11 | - |
| CDD | cd00053 | EGF | 273 | 302 | 0.00120318 | - |
| Pfam | PF00069 | Protein kinase domain | 508 | 737 | 3.9E-41 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 87 | 175 | 4.06E-7 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 485 | 813 | 1.17E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 473 | 578 | 4.5E-30 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 161 | 270 | 4.9E-6 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 616 | 823 | 3.8E-52 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 39 | 160 | 6.8E-6 | IPR036426 |
| SMART | SM00220 | serkin_6 | 504 | 812 | 1.4E-21 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 1 | 832 | 3.5E-189 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 504 | 826 | 34.520187 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 269 | 307 | 8.980488 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 654 | 666 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 510 | 532 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34300.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_025796793.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 [Panicum hallii] | 0 |
| Q9XID3 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana OX=3702 GN=At1g34300 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9QLR5 | non-specific serine/threonine protein kinase OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg9689 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_21983 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah017416, Ah017420 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg40241, Sbi_jg50225, Sbi_jg9751, Sbi_jg9752 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg1825, Seu_jg18930, Seu_jg18931 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00011401, GOSA_00011403 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl41583, Sgl41620, Sgl46417, Sgl46466 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000044682 |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.8AG0001070, CQ.Regalona.r1.8AG0001080 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30218860 |
| Apiaceae | Apium graveolens | 1 | Ag8G01886 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G005500 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103722865 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_03.1631.V1.1, AsparagusV1_07.2556.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G22868 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G0786 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G0853 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11122 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.Contig10.16, evm.TU.LG06.1395 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00021557 |
| Poaceae | Echinochloa crus-galli | 2 | BH01.3067, CH01.3292 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0118740, gene-QOZ80_2AG0118770 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0339400.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_029879, gene-QYE76_029890 |
| Poaceae | Oryza coarctata | 1 | Oco20G000060 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g01100.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G268700, gene-BS78_05G107500 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0502905 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr04G025370, Chr09G006670, Chr13G018130 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G100400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG039990, gene_TRIDC4BG009190 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G255400.1.cds1, TraesCS4B02G059700.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb025540_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-38221, nbis-gene-39372 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g13025, Zma_g15792 |
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG01.1305, evm.TU.LG18.1369, evm.TU.LG18.1370 ... |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_15_RagTag.268 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26511 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5684 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17583 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000001l.76 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21315 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2682 |
| Salicaceae | Populus euphratica | 1 | populus_peu21238 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132617218 |
| Solanaceae | Solanum chilense | 1 | SOLCI000977500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014829 |