Basic Information
Locus ID:
Chr13G016620
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000013 | 27047481 | 27052162 | + | Chr13G016620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 285 | 311 | 0.00604213 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 408 | 559 | 1.5E-24 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 115 | 174 | 1.5E-10 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 85 | 235 | 4.14E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 650 | 8.73E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 566 | 666 | 8.5E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 17 | 254 | 1.0E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 485 | 565 | 5.4E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 375 | 483 | 8.2E-28 | - |
| SMART | SM00369 | LRR_typ_2 | 137 | 160 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 207 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 161 | 184 | 15.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 187 | 209 | 8.012282 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 669 | 24.8808 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 139 | 161 | 7.226811 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 412 | 435 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 278 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_034576741.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Setaria viridis] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V4Q9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_22548 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology