Basic Information
Locus ID:
Chr13G008850
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000013 | 9277738 | 9281361 | + | Chr13G008850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 5 | 302 | 2.55279E-125 | - |
| Pfam | PF00069 | Protein kinase domain | 72 | 301 | 6.6E-58 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 341 | 9.54E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 125 | 314 | 4.4E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 124 | 3.2E-9 | - |
| SMART | SM00220 | serkin_6 | 6 | 302 | 1.6E-82 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 6 | 302 | 45.332699 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 170 | 182 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 376 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_002454092.1 | serine/threonine-protein kinase Nek6 [Sorghum bicolor] | 0 |
| Q6YY75 | Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9V0P5 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_21041 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology