Basic Information
Locus ID:
Chr13G003020
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Tyrosine phosphatase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000013 | 2759190 | 2763605 | + | Chr13G003020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14528 | PFA-DSP_Siw14 | 53 | 223 | 3.49258E-85 | - |
| Pfam | PF04504 | Protein of unknown function, DUF573 | 406 | 494 | 8.1E-16 | IPR007592 |
| Pfam | PF03162 | Tyrosine phosphatase family | 53 | 229 | 3.7E-55 | IPR004861 |
| SUPERFAMILY | SSF52799 | (Phosphotyrosine protein) phosphatases II | 54 | 223 | 9.93E-36 | IPR029021 |
| Gene3D | G3DSA:3.90.190.10 | Protein tyrosine phosphatase superfamily | 52 | 226 | 3.7E-54 | IPR029021 |
| ProSiteProfiles | PS50054 | Dual specificity protein phosphatase domain profile. | 58 | 234 | 27.658529 | IPR020422 |
| ProSitePatterns | PS00383 | Tyrosine specific protein phosphatases active site. | 172 | 182 | - | IPR016130 |
| PRINTS | PR01911 | Plant and fungal dual specificity phosphatase signature | 90 | 103 | 4.7E-25 | IPR020428 |
| PRINTS | PR01911 | Plant and fungal dual specificity phosphatase signature | 150 | 164 | 4.7E-25 | IPR020428 |
| PRINTS | PR01911 | Plant and fungal dual specificity phosphatase signature | 109 | 123 | 4.7E-25 | IPR020428 |
| PRINTS | PR01911 | Plant and fungal dual specificity phosphatase signature | 53 | 70 | 4.7E-25 | IPR020428 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 408 | - | - |
| Coils | Coil | Coil | 314 | 339 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05000.1 | Phosphotyrosine protein phosphatases superfamily protein. | 0 |
| RefSeq | XP_004954058.2 | uncharacterized protein LOC101755591 [Setaria italica] | 0 |
| Q0DX67 | Inositol diphosphatase DSP2 OS=Oryza sativa subsp. japonica OX=39947 GN=DSP2 PE=2 SV=2 | 0 | |
| TrEMBL | M8BGK6 | Putative tyrosine-protein phosphatase OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology