Basic Information
Locus ID:
Chr12G037680
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000012 | 56232880 | 56237475 | - | Chr12G037680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 1 | 315 | 1.00533E-100 | - |
| Pfam | PF00069 | Protein kinase domain | 185 | 315 | 1.6E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 319 | 2.24E-39 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 19 | 69 | 2.7E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 184 | 315 | 2.1E-41 | - |
| SMART | SM00220 | serkin_6 | 1 | 315 | 3.3E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 315 | 19.764292 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 50 | 62 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 169 | - | - |
| Coils | Coil | Coil | 402 | 417 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_004981785.1 | SRSF protein kinase 1 [Setaria italica] | 0 |
| Q96SB4 | SRSF protein kinase 1 OS=Homo sapiens OX=9606 GN=SRPK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9WAM5 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_04492 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology